Cybergenic

by cybergenic.im · im.cybergenic/mcp

Cancer gene co-occurrence and exclusivity in tumour cohorts, with confound controls and exact tests.

OnlineRemote
Category
Developer tools
Connection
Remote (HTTP)
Tools
9 reported
Status
Online

Connect it to your AI

Claude Code

claude mcp add --transport http mcp https://cybergenic.im/mcp?via=mcpregistry

Claude, ChatGPT, Cursor and other apps

Add it as a custom connector with this URL (Streamable HTTP):

https://cybergenic.im/mcp?via=mcpregistry

Cursor, VS Code and other apps (mcp.json)

{
  "mcpServers": {
    "mcp": {
      "url": "https://cybergenic.im/mcp?via=mcpregistry"
    }
  }
}

Tools it offers

9 tools, as the server itself reported during our check on Oct 31, 2026.

  • lookup_gene_pairMeasured co-alteration statistics for two genes in every tumour cohort where Cybergenic's discovery scan tested the pair: tumours with both genes altered against the number expected, odds ratio, p-value and Benjamini-Hoc
  • gene_partnersThe genes whose driver mutations co-occur with, or are mutually exclusive with, a given gene in patient tumours, strongest first by Benjamini-Hochberg q, from every pair Cybergenic's discovery scan tested: one row per pa
  • search_findingsSearch Cybergenic's published findings: gene-pair co-occurrence and mutual exclusivity, survival associations, CRISPR gene dependencies and single-gene leads, each with the verdict the engine measured (strengthened, weak
  • get_findingThe full record of one Cybergenic finding, by id or permalink: what was measured and in which cohort, the statistics (the 2x2 table, odds ratio, p and q), the verdict and why, the confound checks, how many papers mention
  • get_track_recordCybergenic's live track record: how many predictions it has locked in its hash-chained registry before re-testing them, how many replicated in an independent cohort against matched controls (including the less-studied-pa
  • fisher_exact_testFisher's exact test for a 2x2 table [[a, b], [c, d]]: two-sided and both one-sided p-values (computed in log space, so a tiny p keeps its real exponent), the sample odds ratio, and the conditional maximum-likelihood odds
  • chi_square_testPearson chi-square test of independence for an r x c table of counts (2x2 up to 10x10), with Yates' correction for 2x2 tables and the G-test: statistic, degrees of freedom, p-value, expected counts, adjusted residuals, C
  • odds_ratio_relative_riskEffect sizes for a 2x2 table [[a, b], [c, d]] whose rows are two groups and whose columns are outcome yes and no: the odds ratio (Woolf interval, and the conditional exact interval), the relative risk (Katz interval), th
  • fdr_correctionMultiple-testing correction for a list of p-values: Benjamini-Hochberg q-values and Benjamini-Yekutieli, Holm, Hochberg and Bonferroni adjusted p-values, the number of discoveries at alpha for each method, and the Benjam

Questions

What is the Cybergenic MCP server?

Cancer gene co-occurrence and exclusivity in tumour cohorts, with confound controls and exact tests. It is made by cybergenic.im and listed in the official MCP Registry as im.cybergenic/mcp. MCP (Model Context Protocol) is the open standard that lets AI apps like Claude, ChatGPT and Cursor use outside tools.

How do I add Cybergenic to Claude?

In the Claude app or claude.ai, open Settings, then Connectors, choose "Add custom connector" and paste https://cybergenic.im/mcp?via=mcpregistry. In Claude Code, run: claude mcp add --transport http mcp https://cybergenic.im/mcp?via=mcpregistry

How do I add Cybergenic to ChatGPT?

ChatGPT can use remote MCP servers as connectors. In ChatGPT settings, under Apps and Connectors, turn on developer mode if asked, create a new connector and paste https://cybergenic.im/mcp?via=mcpregistry.

How do I add Cybergenic to Cursor?

Open Cursor settings, go to MCP, choose "Add new MCP server" (or edit ~/.cursor/mcp.json) and add: { "mcpServers": { "mcp": { "url": "https://cybergenic.im/mcp?via=mcpregistry" } } }

Does Cybergenic work right now?

Yes. It responded when we last checked on 31 Oct 2026. We check remote MCP servers every day.

What can Cybergenic do?

It gives your AI 9 tools, including lookup_gene_pair, gene_partners, search_findings, get_finding, get_track_record. The full list is on this page.

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